2015 improve explanation of datalist format (#2019)
Fixes #2015 . ### Description Added explanation of datalist format for easier quick-start for new users interested in using the Auto3DSeg AutoRunner. Also simplified the datalist explanation in `run_with_minimal_input.md`, and specified that the `msd_datalist_generator.ipynb` notebook is only used to generate a datalist with cross-validation folds from an existing MSD dataset (and renamed it accordingly to `msd_crossval_datalist_generator.ipynb`). New users landing on the main README of the Auto3DSeg tutorial will now directly see how to create a datalist for their own data, and can easily find where further steps are described. I also removed a paragraph on epoch/iteration numbers from the`auto_runner.ipynb` that is no longer relevant since MONAI v1.1. There is a corresponding PR [here](https://github.com/Project-MONAI/MONAI/pull/8539) that contains improvements to the MONAI library with regards to the datalist format. ### Checks <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Avoid including large-size files in the PR. - [ ] Clean up long text outputs from code cells in the notebook. - [ ] For security purposes, please check the contents and remove any sensitive info such as user names and private key. - [ ] Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the `./figure` folder - [ ] Notebook runs automatically `./runner.sh -t <path to .ipynb file>` --------- Signed-off-by: Daniël Nobbe <daniellnobbe@gmail.com> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Eric Kerfoot <17726042+ericspod@users.noreply.github.com>
D
Daniël Nobbe committed
1fcee2345d7834e8d2cc041b997670be9bf92516
Parent: 9948f26
Committed by GitHub <noreply@github.com>
on 9/26/2025, 6:49:13 PM